BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005F10SP1|AL425411
(1042 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1543 1999 0.0
>3x_Contig1543
Length = 9648
Score = 1999 bits (1002), Expect = 0.0
Identities = 1029/1042 (98%), Gaps = 2/1042 (0%)
Strand = Plus / Minus
Query: 1 acattggtaagattaccgatctgtttgctgatctaccattgtgaatccccgataattata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2447 acattggtaagattaccgatctgtttgctgatctaccattgtgaatccccgataattata 2388
Query: 61 cctcagttccaccatatattacccatggacagtaaagggtaccttaaatcgtatggctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2387 cctcagttccaccatatattacccatggacagtaaagggtaccttaaatcgtatggctgg 2328
Query: 121 caagaaggtgaggccttacggaacggaggactgaaaaaaccgattcttgtgaaacacaag 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2327 caagaaggtgaggc-ttacggaacggaggactgaaaaaaccgattcttgtgaaacacaag 2269
Query: 181 aaagataagaaagggcttggatgtgcaccaggacatgatgacagtsaagcctggtgggaa 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2268 aaagataagaaagggcttggatgtgcaccaggacatgatgacagtgaagcctggtgggaa 2209
Query: 241 cgtttgttcgacggacaacttcgaaacttggacatcaaaagcgggtccgatgggatctcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2208 cgtttgttcgacggacaacttcgaaacttggacatcaaaagcgggtccgatgggatctcg 2149
Query: 301 ttcaaacaaaacgaagtcgtcgcttcttccatatcaaasagcgattcaccactttatcga 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 2148 ttcaaacaaaacgaagtcgtcgcttcttccatatcaaagagcgattcaccactttatcga 2089
Query: 361 tcatttgttagaggtgaagtgttgaaaggtaccattaaaacagatctgccgtccaacaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2088 tcatttgttagaggtgaagtgttgaaaggtaccattaaaacagatctgccgtccaacaat 2029
Query: 421 ggatctactatagttaamctggctgtttctgaagtgacatcgaagaaagataaaaagagc 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2028 ggatctactatagttaaactggctgtttctgaagtgacatcgaagaaagataaaaagagc 1969
Query: 481 aaagacgagaagaagaagaagaagaagaagaagtcgcataaggttgacaagccaaagagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1968 aaagacgagaagaagaagaagaagaagaagaagtcgcataaggttgacaagccaaagagt 1909
Query: 541 aagcataagamagacaagaaggataagcataggaaagacaagaaggataagamggataag 600
|||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1908 aagcataagaaagacaagaaggataagcataggaaagacaagaaggataagaaggataag 1849
Query: 601 amgggtacacacaagcgtaaaasttcacattgatgttctctttattttcttcttgcagca 660
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1848 aagggtacacacaagcgtaaaagttcacattgatgttctctttattttcttcttgcagca 1789
Query: 661 tcatccctccattgtacgtacatgttgtatataaaaattctcgttagatagacgatttaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1788 tcatccctccattgtacgtacatgttgtatataaaaattctcgttagatagacgatttaa 1729
Query: 721 acgcatttagttcatttcaaggttttcaacaaatagtgtaaacaagctaaattattccac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1728 acgcatttagttcatttcaaggttttcaacaaatagtgtaaacaagctaaattattccac 1669
Query: 781 tgtcgaaaagatactgcccaagacgcggcttaacagcattccattggcagcagtccatat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1668 tgtcgaaaagatactgcccaagacgcggcttaacagcattccattggcagcagtccatat 1609
Query: 841 attgamtttctaaatgcccagtttcaagtggcatgttttgttcgtggttcccttcttctt 900
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1608 attgaatttctaaatgcccagtttcaagtggcatgttttgttcgtggttcccttcttctt 1549
Query: 901 ggggkggggggagtgtttgtttgtcctatcggttgcgtctcttttgtcaatcatttggat 960
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1548 ggggtggggggagtgtttgtttgtcctatcggttgcgtctcttttgtcaatcatttggat 1489
Query: 961 atatcttgcattaaatgaacaacctcgggtgctcccaacaaaaccaacgctaarggtcac 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 1488 atatcttgcattaaatgaacaacctcgggtgctcccaacaaaaccaacgctaaggttcac 1429
Query: 1021 aggtgat-aacctattaccaaa 1041
||||||| ||||||||||||||
Sbjct: 1428 aggtgataaacctattaccaaa 1407
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9584
Number of Sequences: 1807
Number of extensions: 9584
Number of successful extensions: 645
Number of sequences better than 1.0e-20: 1
length of query: 1042
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1026
effective length of database: 10,329,639
effective search space: 10598209614
effective search space used: 10598209614
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)